A Google-Powered Gene Sequence Web Search Engine December 3, 2007
Posted by Bertalan Meskó in Bioinformatics, Gene, Google, Invention, Medical Search, Medicine, Medicine 2.0, Semantic Web, genetics.trackback
Yesterday, David Rothman shared an interesting application with me. Query Gene is a Google-powered search engine with which you can combine text and gene sequence fragment web searches. What can you do if you have a sequence and you’d like to know whether this sequence has ever been associated with genetic diseases?
Query Gene is a web-based program that searches for information about genetic sequences on the web. It is distinctive because it is not limited to a single database, but instead captures genetic information on the entire Internet using Google. Query Gene works by taking a gene sequence in combination with other search terms, finds similar sequences using NCBI’s MegaBlast, retrieves the descriptions of those matching genes from NCBI’s Entrez Nucleotide database, and performs a series of Google searches using the combination of your original search terms and each gene description.
In their example, they inserted a nucleotide sequence and a search term (genetic disease associated with). This application identified the sequence as human hemoglobin beta and listed search results like sickle cell disease.
Isn’t it fantastic?



















Looks like the site is down:
“Sorry, we are under maintenance: Please try again in a few weeks”
db
Oh, I see. Thanks for the update, David!